无法访问 GraphViz 可执行文件,即使在 PATH 中添加 GraphViz 文件夹后也是如此



我正在浏览jupyter上的图形,并且由于NetworkX没有提供好的图表表示,因此我尝试使用GraphViz软件包,更具体地说是在那里找到的软件包:https://github.com/chebee7i/nxpd。

我首先导入了NXPD软件包,但是当我尝试使用draw()函数时,我遇到了此错误:

InvocationException:找不到GraphViz的可执行文件。

我首先认为这是因为我没有安装pygraphviz软件包,这是我尝试做的,但是我现在遇到了这个错误:

Collecting pygraphviz
  Using cached pygraphviz-1.3.1.zip
Building wheels for collected packages: pygraphviz
  Running setup.py bdist_wheel for pygraphviz: started
  Running setup.py bdist_wheel for pygraphviz: finished with status 'error'
  Complete output from command "D:Program Files (x86)Anaconda3python.exe" -u -c "import setuptools, tokenize;__file__='C:\Users\VPELL_~1\AppData\Local\Temp\pip-build-vs56t5f2\pygraphviz\setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('rn', 'n'), __file__, 'exec'))" bdist_wheel -d C:UsersVPELL_~1AppDataLocalTemptmpqiovc8brpip-wheel- --python-tag cp35:
  running bdist_wheel
  running build
  running build_py
  creating build
  creating buildlib.win-amd64-3.5
  creating buildlib.win-amd64-3.5pygraphviz
  copying pygraphvizagraph.py -> buildlib.win-amd64-3.5pygraphviz
  copying pygraphvizgraphviz.py -> buildlib.win-amd64-3.5pygraphviz
  copying pygraphvizrelease.py -> buildlib.win-amd64-3.5pygraphviz
  copying pygraphvizversion.py -> buildlib.win-amd64-3.5pygraphviz
  copying pygraphviz__init__.py -> buildlib.win-amd64-3.5pygraphviz
  creating buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_attributes.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_attribute_defaults.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_clear.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_drawing.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_edge_attributes.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_graph.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_html.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_layout.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_node_attributes.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_readwrite.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_string.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_subgraph.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphvizteststest_unicode.py -> buildlib.win-amd64-3.5pygraphviztests
  copying pygraphviztests__init__.py -> buildlib.win-amd64-3.5pygraphviztests
  running egg_info
  writing dependency_links to pygraphviz.egg-infodependency_links.txt
  writing top-level names to pygraphviz.egg-infotop_level.txt
  writing pygraphviz.egg-infoPKG-INFO
  warning: manifest_maker: standard file '-c' not found
  reading manifest file 'pygraphviz.egg-infoSOURCES.txt'
  reading manifest template 'MANIFEST.in'
  warning: no previously-included files matching '*~' found anywhere in distribution
  warning: no previously-included files matching '*.pyc' found anywhere in distribution
  warning: no previously-included files matching '.svn' found anywhere in distribution
  no previously-included directories found matching 'docbuild'
  writing manifest file 'pygraphviz.egg-infoSOURCES.txt'
  copying pygraphvizgraphviz.i -> buildlib.win-amd64-3.5pygraphviz
  copying pygraphvizgraphviz_wrap.c -> buildlib.win-amd64-3.5pygraphviz
  running build_ext
  building 'pygraphviz._graphviz' extension
  creating buildtemp.win-amd64-3.5
  creating buildtemp.win-amd64-3.5Release
  creating buildtemp.win-amd64-3.5Releasepygraphviz
  C:Program Files (x86)Microsoft Visual Studio 14.0VCBINx86_amd64cl.exe /c /nologo /Ox /W3 /GL /DNDEBUG /MD "-ID:Program Files (x86)Anaconda3include" "-ID:Program Files (x86)Anaconda3include" "-IC:Program Files (x86)Microsoft Visual Studio 14.0VCINCLUDE" "-IC:Program Files (x86)Windows Kits10include10.0.10240.0ucrt" "-IC:Program Files (x86)Windows Kits8.1includeshared" "-IC:Program Files (x86)Windows Kits8.1includeum" "-IC:Program Files (x86)Windows Kits8.1includewinrt" /Tcpygraphviz/graphviz_wrap.c /Fobuildtemp.win-amd64-3.5Releasepygraphviz/graphviz_wrap.obj
  graphviz_wrap.c
  pygraphviz/graphviz_wrap.c(2954): fatal error C1083: Cannot open include file: 'graphviz/cgraph.h': No such file or directory
  error: command 'C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\BIN\x86_amd64\cl.exe' failed with exit status 2
  ----------------------------------------
  Running setup.py clean for pygraphviz
Failed to build pygraphviz
Installing collected packages: pygraphviz
  Running setup.py install for pygraphviz: started
    Running setup.py install for pygraphviz: finished with status 'error'
    Complete output from command "D:Program Files (x86)Anaconda3python.exe" -u -c "import setuptools, tokenize;__file__='C:\Users\VPELL_~1\AppData\Local\Temp\pip-build-vs56t5f2\pygraphviz\setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('rn', 'n'), __file__, 'exec'))" install --record C:UsersVPELL_~1AppDataLocalTemppip-fplxc9at-recordinstall-record.txt --single-version-externally-managed --compile:
    running install
    include_dirs=None
    library_dirs=None
    running build
    running build_py
    creating build
    creating buildlib.win-amd64-3.5
    creating buildlib.win-amd64-3.5pygraphviz
    copying pygraphvizagraph.py -> buildlib.win-amd64-3.5pygraphviz
    copying pygraphvizgraphviz.py -> buildlib.win-amd64-3.5pygraphviz
    copying pygraphvizrelease.py -> buildlib.win-amd64-3.5pygraphviz
    copying pygraphvizversion.py -> buildlib.win-amd64-3.5pygraphviz
    copying pygraphviz__init__.py -> buildlib.win-amd64-3.5pygraphviz
    creating buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_attributes.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_attribute_defaults.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_clear.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_drawing.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_edge_attributes.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_graph.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_html.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_layout.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_node_attributes.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_readwrite.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_string.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_subgraph.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphvizteststest_unicode.py -> buildlib.win-amd64-3.5pygraphviztests
    copying pygraphviztests__init__.py -> buildlib.win-amd64-3.5pygraphviztests
    running egg_info
    writing dependency_links to pygraphviz.egg-infodependency_links.txt
    writing pygraphviz.egg-infoPKG-INFO
    writing top-level names to pygraphviz.egg-infotop_level.txt
    warning: manifest_maker: standard file '-c' not found
    reading manifest file 'pygraphviz.egg-infoSOURCES.txt'
    reading manifest template 'MANIFEST.in'
    warning: no previously-included files matching '*~' found anywhere in distribution
    warning: no previously-included files matching '*.pyc' found anywhere in distribution
    warning: no previously-included files matching '.svn' found anywhere in distribution
    no previously-included directories found matching 'docbuild'
    writing manifest file 'pygraphviz.egg-infoSOURCES.txt'
    copying pygraphvizgraphviz.i -> buildlib.win-amd64-3.5pygraphviz
    copying pygraphvizgraphviz_wrap.c -> buildlib.win-amd64-3.5pygraphviz
    running build_ext
    building 'pygraphviz._graphviz' extension
    creating buildtemp.win-amd64-3.5
    creating buildtemp.win-amd64-3.5Release
    creating buildtemp.win-amd64-3.5Releasepygraphviz
    C:Program Files (x86)Microsoft Visual Studio 14.0VCBINx86_amd64cl.exe /c /nologo /Ox /W3 /GL /DNDEBUG /MD -INone "-ID:Program Files (x86)Anaconda3include" "-ID:Program Files (x86)Anaconda3include" "-IC:Program Files (x86)Microsoft Visual Studio 14.0VCINCLUDE" "-IC:Program Files (x86)Windows Kits10include10.0.10240.0ucrt" "-IC:Program Files (x86)Windows Kits8.1includeshared" "-IC:Program Files (x86)Windows Kits8.1includeum" "-IC:Program Files (x86)Windows Kits8.1includewinrt" /Tcpygraphviz/graphviz_wrap.c /Fobuildtemp.win-amd64-3.5Releasepygraphviz/graphviz_wrap.obj
    graphviz_wrap.c
    pygraphviz/graphviz_wrap.c(2954): fatal error C1083: Cannot open include file: 'graphviz/cgraph.h': No such file or directory
    error: command 'C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\BIN\x86_amd64\cl.exe' failed with exit status 2
    ----------------------------------------
  Failed building wheel for pygraphviz
Command ""D:Program Files (x86)Anaconda3python.exe" -u -c "import setuptools, tokenize;__file__='C:\Users\VPELL_~1\AppData\Local\Temp\pip-build-vs56t5f2\pygraphviz\setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('rn', 'n'), __file__, 'exec'))" install --record C:UsersVPELL_~1AppDataLocalTemppip-fplxc9at-recordinstall-record.txt --single-version-externally-managed --compile" failed with error code 1 in C:UsersVPELL_~1AppDataLocalTemppip-build-vs56t5f2pygraphviz
You are using pip version 8.1.2, however version 9.0.1 is available.
You should consider upgrading via the 'python -m pip install --upgrade pip' command.

在stackoverflow上搜索后,我添加了以下目录:

D:Program Files (x86)Anaconda3Libsite-packagesgraphvizbin
D:Program Files (x86)Anaconda3Libsite-packagesgraphvizincludegraphviz

通往我的道路,但没有改变任何东西。

感谢您的帮助。

您是否在命令提示符中添加了路径:

PATH = %PATH%;<new path stuff>

或您使用系统属性中的环境变量添加了它?

我发现我需要使用系统属性将其添加,以使其宽。当仅使用命令提示符添加时,它仍然没有用。

尝试使用os.environ在jupyter笔记本本身中添加路径。

import os
os.environ["PATH"] += os.pathsep + 'C:/Program Files (x86)/Graphviz2.38/bin/'

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